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{"Abstract":["Data Description<\/strong>:<\/p>\n\nTo improve SOC estimation in the United States, we upscaled site-based SOC measurements to the continental scale using multivariate geographic clustering (MGC) approach coupled with machine learning models. First, we used the MGC approach to segment the United States at 30 arc second resolution based on principal component information from environmental covariates (gNATSGO soil properties, WorldClim bioclimatic variables, MODIS biological variables, and physiographic variables) to 20 SOC regions. We then trained separate random forest model ensembles for each of the SOC regions identified using environmental covariates and soil profile measurements from the International Soil Carbon Network (ISCN) and an Alaska soil profile data. We estimated United States SOC for 0-30 cm and 0-100 cm depths were 52.6 + 3.2 and 108.3 + 8.2 Pg C, respectively.<\/p>\n\nFiles in collection (32):<\/p>\n\nCollection contains 22 soil properties geospatial rasters, 4 soil SOC geospatial rasters, 2 ISCN site SOC observations csv files, and 4 R scripts<\/p>\n\ngNATSGO TIF files:<\/p>\n\n├── available_water_storage_30arc_30cm_us.tif [30 cm depth soil available water storage]\n├── available_water_storage_30arc_100cm_us.tif [100 cm depth soil available water storage]\n├── caco3_30arc_30cm_us.tif [30 cm depth soil CaCO3 content]\n├── caco3_30arc_100cm_us.tif [100 cm depth soil CaCO3 content]\n├── cec_30arc_30cm_us.tif [30 cm depth soil cation exchange capacity]\n├── cec_30arc_100cm_us.tif [100 cm depth soil cation exchange capacity]\n├── clay_30arc_30cm_us.tif [30 cm depth soil clay content]\n├── clay_30arc_100cm_us.tif [100 cm depth soil clay content]\n├── depthWT_30arc_us.tif [depth to water table]\n├── kfactor_30arc_30cm_us.tif [30 cm depth soil erosion factor]\n├── kfactor_30arc_100cm_us.tif [100 cm depth soil erosion factor]\n├── ph_30arc_100cm_us.tif [100 cm depth soil pH]\n├── ph_30arc_100cm_us.tif [30 cm depth soil pH]\n├── pondingFre_30arc_us.tif [ponding frequency]\n├── sand_30arc_30cm_us.tif [30 cm depth soil sand content]\n├── sand_30arc_100cm_us.tif [100 cm depth soil sand content]\n├── silt_30arc_30cm_us.tif [30 cm depth soil silt content]\n├── silt_30arc_100cm_us.tif [100 cm depth soil silt content]\n├── water_content_30arc_30cm_us.tif [30 cm depth soil water content]\n└── water_content_30arc_100cm_us.tif [100 cm depth soil water content]<\/p>\n\nSOC TIF files:<\/p>\n\n├──30cm SOC mean.tif [30 cm depth soil SOC]\n├──100cm SOC mean.tif [100 cm depth soil SOC]\n├──30cm SOC CV.tif [30 cm depth soil SOC coefficient of variation]\n└──100cm SOC CV.tif [100 cm depth soil SOC coefficient of variation]<\/p>\n\nsite observations csv files:<\/p>\n\nISCN_rmNRCS_addNCSS_30cm.csv 30cm ISCN sites SOC replaced NRCS sites with NCSS centroid removed data<\/p>\n\nISCN_rmNRCS_addNCSS_100cm.csv 100cm ISCN sites SOC replaced NRCS sites with NCSS centroid removed data<\/p>\n\n\nData format<\/strong>:<\/p>\n\nGeospatial files are provided in Geotiff format in Lat/Lon WGS84 EPSG: 4326 projection at 30 arc second resolution.<\/p>\n\nGeospatial projection<\/strong>: <\/p>\n\nGEOGCS["GCS_WGS_1984",\n DATUM["D_WGS_1984",\n SPHEROID["WGS_1984",6378137,298.257223563]],\n PRIMEM["Greenwich",0],\n UNIT["Degree",0.017453292519943295]]\n(base) [jbk@theseus ltar_regionalization]$ g.proj -w\nGEOGCS["wgs84",\n DATUM["WGS_1984",\n SPHEROID["WGS_1984",6378137,298.257223563]],\n PRIMEM["Greenwich",0],\n UNIT["degree",0.0174532925199433]]\n<\/code>\n\n <\/p>"]}
Abstract Estimates of soil organic carbon (SOC) stocks are essential for many environmental applications. However, significant inconsistencies exist in SOC stock estimates for the U.S. across current SOC maps. We propose a framework that combines unsupervised multivariate geographic clustering (MGC) and supervised Random Forests regression, improving SOC maps by capturing heterogeneous relationships with SOC drivers. We first used MGC to divide the U.S. into 20 SOC regions based on the similarity of covariates (soil biogeochemical, bioclimatic, biological, and physiographic variables). Subsequently, separate Random Forests models were trained for each SOC region, utilizing environmental covariates and SOC observations. Our estimated SOC stocks for the U.S. (52.6 ± 3.2 Pg for 0–30 cm and 108.3 ± 8.2 Pg for 0–100 cm depth) were within the range estimated by existing products like Harmonized World Soil Database, HWSD (46.7 Pg for 0–30 cm and 90.7 Pg for 0–100 cm depth) and SoilGrids 2.0 (45.7 Pg for 0–30 cm and 133.0 Pg for 0–100 cm depth). However, independent validation with soil profile data from the National Ecological Observatory Network showed that our approach (R2 = 0.51) outperformed the estimates obtained from Harmonized World Soil Database (R2 = 0.23) and SoilGrids 2.0 (R2 = 0.39) for the topsoil (0–30 cm). Uncertainty analysis (e.g., low representativeness and high coefficients of variation) identified regions requiring more measurements, such as Alaska and the deserts of the U.S. Southwest. Our approach effectively captures the heterogeneous relationships between widely available predictors and the current SOC baseline across regions, offering reliable SOC estimates at 1 km resolution for benchmarking Earth system models.
Todd-Brown, Katherine E.; Abramoff, Rose Z.; Beem-Miller, Jeffrey; Blair, Hava K.; Earl, Stevan; Frederick, Kristen J.; Fuka, Daniel R.; Guevara Santamaria, Mario; Harden, Jennifer W.; Heckman, Katherine; et al
(, Biogeosciences)
Abstract. In the age of big data, soil data are more available and richer than ever, but – outside of a few large soil survey resources – they remain largely unusable for informing soil management and understanding Earth system processes beyond the original study.Data science has promised a fully reusable research pipeline where data from past studies are used to contextualize new findings and reanalyzed for new insight.Yet synthesis projects encounter challenges at all steps of the data reuse pipeline, including unavailable data, labor-intensive transcription of datasets, incomplete metadata, and a lack of communication between collaborators.Here, using insights from a diversity of soil, data, and climate scientists, we summarize current practices in soil data synthesis across all stages of database creation: availability, input, harmonization, curation, and publication.We then suggest new soil-focused semantic tools to improve existing data pipelines, such as ontologies, vocabulary lists, and community practices.Our goal is to provide the soil data community with an overview of current practices in soil data and where we need to go to fully leverage big data to solve soil problems in the next century.
Malhotra, Avni; Todd-Brown, Katherine; Nave, Lucas E; Batjes, Niels H; Holmquist, James R; Hoyt, Alison M; Iversen, Colleen M; Jackson, Robert B; Lajtha, Kate; Lawrence, Corey; et al
(, Progress in Physical Geography: Earth and Environment)
Soil carbon has been measured for over a century in applications ranging from understanding biogeochemical processes in natural ecosystems to quantifying the productivity and health of managed systems. Consolidating diverse soil carbon datasets is increasingly important to maximize their value, particularly with growing anthropogenic and climate change pressures. In this progress report, we describe recent advances in soil carbon data led by the International Soil Carbon Network and other networks. We highlight priority areas of research requiring soil carbon data, including (a) quantifying boreal, arctic and wetland carbon stocks, (b) understanding the timescales of soil carbon persistence using radiocarbon and chronosequence studies, (c) synthesizing long-term and experimental data to inform carbon stock vulnerability to global change, (d) quantifying root influences on soil carbon and (e) identifying gaps in model–data integration. We also describe the landscape of soil datasets currently available, highlighting their strengths, weaknesses and synergies. Now more than ever, integrated soil data are needed to inform climate mitigation, land management and agricultural practices. This report will aid new data users in navigating various soil databases and encourage scientists to make their measurements publicly available and to join forces to find soil-related solutions.
Harden, Jennifer W.; Hugelius, Gustaf; Ahlström, Anders; Blankinship, Joseph C.; Bond‐Lamberty, Ben; Lawrence, Corey R.; Loisel, Julie; Malhotra, Avni; Jackson, Robert B.; Ogle, Stephen; et al
(, Global Change Biology)
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